I wrote a little Eclipse plug-in that addresses this issue. It searches all projects for test cases that don't have any references in the workspace.
The search for unreferenced tests can be started from the Search menu:
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Here is what the result dialog looks like:
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The plug-in can be downloaded here.
Notes: This plug-in is not applicable to JUnit 4; The plug-in does not handle more complicated scenarios, e.g. a hierarchy of TestSuites.
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